Stem-loop ptr-mir-328

Accession

MI0008618

Description

Pan troglodytes ptr-mir-328 precursor miRNA

Literature search

3 open access papers mention ptr-mir-328
(10 sentences)

Sequence

826 reads, 9.0 reads per million, 24 experiments

uggagugggggggcaggaggggcucagggagaaagugcauacagcccCUGGCCCUCUCUGCCCUUCCGUccccu
.(((.((((((((((((.(((((.(((((.......((.....)))))))))))).)))))))))))))))...

Structure

--u   g            a     u     agaaagu  a 
   gga ugggggggcagg ggggc caggg       gc u
   ||| |||||||||||| ||||| |||||       || a
   ccU GCCUUCCCGUCU UCCCG GUCcc       cg c
ucc   -            C     -     -------  a 

Annotation confidence Not enough data

Genome context

chr16: 58080368-58080441 [-]

Mature ptr-miR-328-3p

• Accession: MIMAT0008100
• Description: Pan troglodytes ptr-miR-328-3p mature miRNA
• Sequence: 48 - CUGGCCCUCUCUGCCCUUCCGU - 69
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70