Stem-loop ptr-mir-340

Accession

MI0008628

Description

Pan troglodytes ptr-mir-340 precursor miRNA

Sequence

uuguaccuggugugaUUAUAAAGCAAUGAGACUGAUUgucauaugucguuugugggauccgucucaguuacuuuauagccauaccugguaucuu
..(((((.((((((.((((((((...((((((.((((.(((((.......))))))))).))))))....)))))))).)))))).)))))...

Structure

-uu     u      a        -CAA      U    g     ug 
   guacc ggugug UUAUAAAG    UGAGAC GAUU ucaua  u
   ||||| |||||| ||||||||    |||||| |||| |||||  c
   uaugg ccauac gauauuuc    acucug cuag ggugu  g
uuc     u      c        auug      c    -     uu 

Annotation confidence Not enough data

Genome context

chr5: 180589191-180589284 [-]

Mature ptr-miR-340

• Accession: MIMAT0008109
• Description: Pan troglodytes ptr-miR-340 mature miRNA
• Sequence: 16 - UUAUAAAGCAAUGAGACUGAUU - 37
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70