Stem-loop ptr-mir-342

Accession

MI0008629

Description

Pan troglodytes ptr-mir-342 precursor miRNA

Sequence

aaacugggcucaaggugaggggugcuaucugugauugagggacauggcuaauggaauugUCUCACACAGAAAUCGCACCCGUcaccuuggccuacuua
....(((((.((((((((.((((((..((((((.....((((((...((...))...)))))).))))))....)))))).)))))))))))))....

Structure

aaac     u        g      --ua      auuga      ugg  a 
    ugggc caagguga gggugc    ucugug     gggaca   cu  
    ||||| |||||||| ||||||    ||||||     ||||||   || a
    auccg guuccacU CCCACG    AGACAC     CUCUgu   gg  
auuc     -        G      CUAA      ----A      uaa  u 

Annotation confidence Not enough data

Genome context

chr14: 85331362-85331459 [+]

Mature ptr-miR-342

• Accession: MIMAT0008110
• Description: Pan troglodytes ptr-miR-342 mature miRNA
• Sequence: 60 - UCUCACACAGAAAUCGCACCCGU - 82
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70