Stem-loop ptr-mir-362

Accession

MI0008635

Description

Pan troglodytes ptr-mir-362 precursor miRNA

Literature search

1 open access papers mention ptr-mir-362
(1 sentences)

Sequence

654 reads, 7.0 reads per million, 24 experiments

uugAAUCCUUGGAACCUAGGUGUGAgugcuauuucagugcAACACACCUAUUCAAGGAUUCAaa
(((((((((((((...((((((((.(((((.....)))))..))))))))))))))))))))).

Structure

-             ACC        -A     a 
 uugAAUCCUUGGA   UAGGUGUG  gugcu u
 |||||||||||||   ||||||||  ||||| u
 aACUUAGGAACUU   AUCCACAC  cguga u
a             ---        AA     c 

Annotation confidence High

Genome context

chrX: 49893724-49893787 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ptr-mir-362

Mature ptr-miR-362-5p

• Accession: MIMAT0052339
• Description: Pan troglodytes ptr-miR-362-5p mature miRNA
• Sequence: 4 - AAUCCUUGGAACCUAGGUGUGA - 25
• Evidence: not_experimental

Mature ptr-miR-362-3p

• Accession: MIMAT0008116
• Description: Pan troglodytes ptr-miR-362-3p mature miRNA
• Sequence: 41 - AACACACCUAUUCAAGGAUUCA - 62
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70