Stem-loop ptr-mir-370

Accession

MI0008640

Description

Pan troglodytes ptr-mir-370 precursor miRNA

Sequence

1176 reads, 10.0 reads per million, 21 experiments

gacagagaagcCAGGUCACGUCUCUGCAGUUACacagcucacgaguGCCUGCUGGGGUGGAACCUGGUcugucu
(((((....(((((((..((((((.((((...(((.........))).)))).))))))..)))))))))))).

Structure

-     agaa       CA      U    UUA   agc 
 gacag    gcCAGGU  CGUCUC GCAG   Cac   u
 |||||    |||||||  |||||| ||||   |||   c
 cuguc    UGGUCCA  GUGGGG CGUC   Gug   a
u     ----       AG      U    --C   agc 

Annotation confidence High

Genome context

chr14: 86156068-86156141 [+]

Mature ptr-miR-370-5p

• Accession: MIMAT0052343
• Description: Pan troglodytes ptr-miR-370-5p mature miRNA
• Sequence: 12 - CAGGUCACGUCUCUGCAGUUAC - 33
• Evidence: not_experimental

Mature ptr-miR-370-3p

• Accession: MIMAT0008120
• Description: Pan troglodytes ptr-miR-370-3p mature miRNA
• Sequence: 47 - GCCUGCUGGGGUGGAACCUGGU - 68
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70