Stem-loop ptr-mir-378a

Accession

MI0008651

Description

Pan troglodytes ptr-mir-378a precursor miRNA

Sequence

324461 reads, 2335.0 reads per million, 24 experiments

gggCUCCUGACUCCAGGUCCUGUGUguuaccuagaaauagcACUGGACUUGGAGUCAGAAGGCcu
((.((.((((((((((((((.((((..(........)..)))).)))))))))))))).)).)).

Structure

-  g  C              U    gu acc 
 gg CU CUGACUCCAGGUCC GUGU  u   u
 || || |||||||||||||| ||||  |    
 cC GA GACUGAGGUUCAGG CAcg  a   a
u  G  A              U    au aag 

Annotation confidence High

Genome context

chr5: 149930259-149930323 [+]

Mature ptr-miR-378a-5p

• Accession: MIMAT0052350
• Description: Pan troglodytes ptr-miR-378a-5p mature miRNA
• Sequence: 4 - CUCCUGACUCCAGGUCCUGUGU - 25
• Evidence: not_experimental

Mature ptr-miR-378a-3p

• Accession: MIMAT0008130
• Description: Pan troglodytes ptr-miR-378a-3p mature miRNA
• Sequence: 42 - ACUGGACUUGGAGUCAGAAGGC - 63
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70