Stem-loop ptr-mir-433

Accession

MI0008668

Description

Pan troglodytes ptr-mir-433 precursor miRNA

Literature search

1 open access papers mention ptr-mir-433
(89 sentences)

Sequence

cggggagaaguacggugagccugucauuauucagagaggcuagauccucuguguugagaaggAUCAUGAUGGGCUCCUCGGUGUucuccagg
...((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...))))))...

Structure

cgg      gua   u           u   --------  g     cu 
   ggagaa   cgg gagccugucau auu        ca agagg  a
   ||||||   ||| ||||||||||| |||        || |||||   
   ccucuU   GCU CUCGGGUAGUA UAg        gu ucucc  g
gga      GUG   C           C   gaagaguu  g     ua 

Annotation confidence Not enough data

Genome context

chr14: 86126847-86126938 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ptr-mir-433

Mature ptr-miR-433

• Accession: MIMAT0008147
• Description: Pan troglodytes ptr-miR-433 mature miRNA
• Sequence: 63 - AUCAUGAUGGGCUCCUCGGUGU - 84
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70