Stem-loop ptr-mir-454

Accession

MI0008678

Description

Pan troglodytes ptr-mir-454 precursor miRNA

Literature search

1 open access papers mention ptr-mir-454
(8 sentences)

Sequence

ucuguuuaucaccagauccuagaacccuaucaauauugucucugcuguguaaauaguucugagUAGUGCAAUAUUGCUUAUAGGGUuuugguguuuggaaagaacaaugggcag
.(((((((((.((((((.((((((((((((((((((((((((.(((((....)))))...)))....)))))))))...)))))))))))).))))))...))....)))))))

Structure

u       ----  --a      c            ---         ----   --u     g 
 cuguuua    uc   ccagau cuagaacccuau   caauauugu    cuc   gcugu u
 |||||||    ||   |||||| ||||||||||||   |||||||||    |||   |||||  
 gacgggu    ag   gguuug gguuuUGGGAUA   GUUAUAACG    gag   ugaua a
-       aaca  aaa      u            UUC         UGAU   ucu     a 

Annotation confidence Not enough data

Genome context

chr17: 58441228-58441341 [-]

Mature ptr-miR-454

• Accession: MIMAT0008156
• Description: Pan troglodytes ptr-miR-454 mature miRNA
• Sequence: 64 - UAGUGCAAUAUUGCUUAUAGGGU - 86
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70