miRBase entry: ptr-mir-455

Stem-loop ptr-mir-455


Accession
MI0008679
Description
Pan troglodytes ptr-mir-455 precursor miRNA


Sequence

2770 reads, 26.0 reads per million, 24 experiments
cccuggcgugagggUAUGUGCCUUUGGACUACAUCGUggaagccagcaccauGCAGUCCAUGGGCAUAUACACuugccucaaggccuaugucauc
....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..))).........

Structure
-----cccu   -g     -----          U      A   C   gaa 
         ggc  ugagg     gUAUGUGCCU UGGACU CAU GUg   g
         |||  |||||     |||||||||| |||||| ||| |||    
         ccg  acucc     CAUAUACGGG ACCUGA Gua cac   c
cuacuguau   ga     guuCA          U      C   c   gac 


Annotation confidence Medium
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Genome context
chr9: 92164401-92164495 [+]

Database links

Mature ptr-miR-455-5p

Accession MIMAT0052365
Description Pan troglodytes ptr-miR-455-5p mature miRNA
Sequence 15 - UAUGUGCCUUUGGACUACAUCGU - 37
Evidence not_experimental

Mature ptr-miR-455-3p

Accession MIMAT0008157
Description Pan troglodytes ptr-miR-455-3p mature miRNA
Sequence 53 - GCAGUCCAUGGGCAUAUACAC - 73
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70