miRBase entry: ptr-mir-486

Stem-loop ptr-mir-486


Accession
MI0008682
Description
Pan troglodytes ptr-mir-486 precursor miRNA


Sequence

11582 reads, 91.0 reads per million, 24 experiments
gcaUCCUGUACUGAGCUGCCCCGAGgcccuucaugcugcccagcuCGGGGCAGCUCAGUACAGGAUA
..(((((((((((((((((((((((..................))))))))))))))))))))))).

Structure
gc                       gcccuuca 
  aUCCUGUACUGAGCUGCCCCGAG        u
  |||||||||||||||||||||||         
  UAGGACAUGACUCGACGGGGCuc        g
-A                       gacccguc 


Annotation confidence High
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Genome context
chr8: 41373748-41373814 [-]

Database links

Mature ptr-miR-486-5p

Accession MIMAT0008160
Description Pan troglodytes ptr-miR-486-5p mature miRNA
Sequence 4 - UCCUGUACUGAGCUGCCCCGAG - 25
Evidence not_experimental

Mature ptr-miR-486-3p

Accession MIMAT0052367
Description Pan troglodytes ptr-miR-486-3p mature miRNA
Sequence 46 - CGGGGCAGCUCAGUACAGGAUA - 67
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70