Stem-loop ptr-mir-487a

Accession

MI0008683

Description

Pan troglodytes ptr-mir-487a precursor miRNA

Literature search

1 open access papers mention ptr-mir-487a
(4 sentences)

Sequence

guacuugaagagugguuaucccugcuguguucgcugaauuuaugacgAAUCAUACAGGGACAUCCAGUUuuucaguauc
(((((.(((((.(((...((((((.(((((((((.........).)))).))))))))))...))).))))).))))).

Structure

-     u     g   uua      c    -    - uga 
 guacu gaaga ugg   ucccug ugug uucg c   a
 ||||| ||||| |||   |||||| |||| |||| |   u
 uauga uuuUU ACC   AGGGAC AUAC AAgc g   u
c     c     G   UAC      -    U    a uau 

Annotation confidence Low

Genome context

chr14: 86300680-86300758 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from ptr-mir-487a

Mature ptr-miR-487a

• Accession: MIMAT0008161
• Description: Pan troglodytes ptr-miR-487a mature miRNA
• Sequence: 48 - AAUCAUACAGGGACAUCCAGUU - 69
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70