Stem-loop ptr-mir-492

Accession

MI0008689

Description

Pan troglodytes ptr-mir-492 precursor miRNA

Literature search

1 open access papers mention ptr-mir-492
(3 sentences)

Sequence

5 reads, 1.0 reads per million, 5 experiments

aacuacagccacuacuacaggaccaucaAGGACCUGCGGGACAAGAUUCUgggugccaccauugagaacgccaggauuguccugcagaucaacaaugcucaacuggcugcagaug
..((.((((((.........((.(((....((.((((((((((..(((((((((.(((....)).).)).))))))))))))))))).))....))).))...)))))).))...

Structure

-aa  a      cuacuacag  c   caAG  C          AG       -  g -  c 
   cu cagcca         ga cau    GA CUGCGGGACA  AUUCUgg gu c ca c
   || ||||||         || |||    || ||||||||||  ||||||| || | ||  
   ga gucggu         cu gua    cu gacguccugu  uaggacc ca g gu a
gua  c      ------caa  c   acaa  a          --       g  a a  u 

Annotation confidence Not enough data

Genome context

chr12: 97572526-97572640 [+]

Mature ptr-miR-492-5p

• Accession: MIMAT0008167
• Description: Pan troglodytes ptr-miR-492-5p mature miRNA
• Sequence: 29 - AGGACCUGCGGGACAAGAUUCU - 50
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70