Stem-loop ptr-mir-503

Accession

MI0008698

Description

Pan troglodytes ptr-mir-503 precursor miRNA

Literature search

1 open access papers mention ptr-mir-503
(23 sentences)

Sequence

ugcccUAGCAGCGGGAACAGUUCUGCAGugagcgaucggugcucuggaguauuguuuccgcugccagggu
.(((((.((((((((((((((.((.((..(((((.....))))))).)).)))))))))))))).)))))

Structure

u     A              U  G  Gu     a 
 gcccU GCAGCGGGAACAGU CU CA  gagcg u
 ||||| |||||||||||||| || ||  ||||| c
 uggga cgucgccuuuguua ga gu  cucgu g
-     c              u  g  --     g 

Annotation confidence Not enough data

Genome context

chrX: 134416955-134417024 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from ptr-mir-503

Mature ptr-miR-503

• Accession: MIMAT0008176
• Description: Pan troglodytes ptr-miR-503 mature miRNA
• Sequence: 6 - UAGCAGCGGGAACAGUUCUGCAG - 28
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70