Stem-loop ptr-mir-505

Accession

MI0008700

Description

Pan troglodytes ptr-mir-505 precursor miRNA

Sequence

gaugcacccagugggggagccaggaaguauugauguuucugccaguuuagCGUCAACACUUGCUGGUUUCCUcucuggagcau
.((((..((((.(((((((((((.((((.((((((((...........)))))))).)))).))))))))))).)))).))))

Structure

g    ac    u           g    a        ucug 
 augc  ccag gggggagccag aagu uugauguu    c
 ||||  |||| ||||||||||| |||| ||||||||    c
 uacg  gguc cUCCUUUGGUC UUCA AACUGCga    a
-    -a    u           G    C        uuug 

Annotation confidence Low

Genome context

chrX: 139848044-139848126 [-]

Mature ptr-miR-505

• Accession: MIMAT0008178
• Description: Pan troglodytes ptr-miR-505 mature miRNA
• Sequence: 51 - CGUCAACACUUGCUGGUUUCCU - 72
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70