Accession
MI0008714
Description
Pan troglodytes
ptr-mir-518c precursor miRNA
Sequence
76
reads,
10.0
reads per million, 11 experiments
caagaagaucucaugcugugacuCUCUGGAGGGAAGCACUUUCUGUUgucugaaagaaaaCAAAGCGCUUCUCUUUAGAGUguuacgguuugagaaaagc
........(((((.((((((((.((((((((((((((.(((..((((.(((...))).))))))).)))))))))))))).)))))))).))))).....
........(((((.((((((((.((((((((((((((.(((..((((.(((...))).))))))).)))))))))))))).)))))))).))))).....
Structure
caagaaga u u A UC g g
ucuca gcugugac CUCUGGAGGGAAGC CUU UGUU ucu
||||| |||||||| |||||||||||||| ||| |||| ||| a
agagu uggcauug GAGAUUUCUCUUCG GAA ACaa aga
---cgaaa u U C -- a a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr19: 56056864-56056963 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from ptr-mir-518c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-518c-5p
| Accession | MIMAT0052381 |
| Description | Pan troglodytes ptr-miR-518c-5p mature miRNA |
| Sequence | 24 - CUCUGGAGGGAAGCACUUUCUGUU - 47 |
| Evidence | not_experimental |
Mature ptr-miR-518c-3p
| Accession | MIMAT0008188 |
| Description | Pan troglodytes ptr-miR-518c-3p mature miRNA |
| Sequence | 61 - CAAAGCGCUUCUCUUUAGAGU - 81 |
| Evidence | not_experimental |
References
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