Stem-loop ptr-mir-519b

Accession

MI0008719

Description

Pan troglodytes ptr-mir-519b precursor miRNA

Sequence

augcugugacccucuagagggaagcgcuuucuguugucugaaagaaaagAAAGUGCAUCCUUUUAGAGGUUuacuguuug
..((.((((.((((((((((((.(((((((((....(((...)))..))))))))).)))))))))))).)))).))...

Structure

-au  u    c            a         guug   g 
   gc guga ccucuagaggga gcgcuuucu    ucu  
   || |||| |||||||||||| |||||||||    ||| a
   ug cauU GGAGAUUUUCCU CGUGAAAga    aga  
guu  u    U            A         --aa   a 

Annotation confidence Low

Genome context

chr19: 56043334-56043413 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from ptr-mir-519b

Mature ptr-miR-519b

• Accession: MIMAT0008193
• Description: Pan troglodytes ptr-miR-519b mature miRNA
• Sequence: 50 - AAAGUGCAUCCUUUUAGAGGUU - 71
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70