Stem-loop ptr-mir-526a-1

Accession

MI0008737

Description

Pan troglodytes ptr-mir-526a-1 precursor miRNA

Sequence

ucaggcugugaccCUCUAGAGGGAAGCACUUUCUGuugcuugaaagaagagaaagcgcuuccuuuuagaggauuacucuuugag
(((((..((((.(((((((((((((((.((((((.((.((....)))).)))))).))))))))))))))).))))..))))).

Structure

-     cu    c               A      G  g  u 
 ucagg  guga cCUCUAGAGGGAAGC CUUUCU uu cu g
 |||||  |||| ||||||||||||||| |||||| || ||  
 aguuu  cauu ggagauuuuccuucg gaaaga aa ga a
g     cu    a               c      g  -  a 

Annotation confidence Low

Genome context

chr19: 56054378-56054461 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ptr-mir-526a-1

Mature ptr-miR-526a

• Accession: MIMAT0008210
• Description: Pan troglodytes ptr-miR-526a mature miRNA
• Sequence: 14 - CUCUAGAGGGAAGCACUUUCUG - 35
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70