Stem-loop ptr-mir-548f-1

Accession

MI0008750

Description

Pan troglodytes ptr-mir-548f-1 precursor miRNA

Literature search

1 open access papers mention ptr-mir-548f-1
(2 sentences)

Sequence

uuagguuggugcaaaagaaaucaguuuuugccauuacuuucuauggcAAAAACUGUAAUUACUUUUgcaccaaccuaauag
(((((((((((((((((.((((((((((((((((........)))))))))))))..))).)))))))))))))))))...

Structure

---                 a   --             uac 
   uuagguuggugcaaaag aau  caguuuuugccau   u
   ||||||||||||||||| |||  |||||||||||||    
   aauccaaccacgUUUUC UUA  GUCAAAAAcggua   u
gau                 A   AU             ucu 

Annotation confidence Not enough data

Genome context

chr18: 57191372-57191452 [+]

Mature ptr-miR-548f

• Accession: MIMAT0008221
• Description: Pan troglodytes ptr-miR-548f mature miRNA
• Sequence: 48 - AAAAACUGUAAUUACUUUU - 66
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70