Stem-loop ptr-mir-548f-2

Accession

MI0008751

Description

Pan troglodytes ptr-mir-548f-2 precursor miRNA

Literature search

1 open access papers mention ptr-mir-548f-2
(2 sentences)

Sequence

auuagguuggugcaaaccuaauugcaauuuuugcaguuuuuuuaaguaauugcAAAAACUGUAAUUACUUUUgcaccaaccuaaua
((((((((((((((((..((((((((.(((((((((((.........))))))))))).))))))))..)))))))))))))))).

Structure

-                cc        a           uuu 
 auuagguuggugcaaa  uaauugca uuuuugcaguu   u
 ||||||||||||||||  |||||||| |||||||||||   u
 uaauccaaccacgUUU  AUUAAUGU AAAAAcguuaa   a
a                UC        C           uga 

Annotation confidence Not enough data

Genome context

chr5: 110004035-110004120 [-]

Mature ptr-miR-548f

• Accession: MIMAT0008221
• Description: Pan troglodytes ptr-miR-548f mature miRNA
• Sequence: 54 - AAAAACUGUAAUUACUUUU - 72
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70