Stem-loop ptr-mir-548l

Accession

MI0008761

Description

Pan troglodytes ptr-mir-548l precursor miRNA

Literature search

1 open access papers mention ptr-mir-548l
(2 sentences)

Sequence

uauuagguuggugcAAAAGUAUUUGCGGGUUUUGUCauagaaaguaauggcaaaaacugcaguuacuugugcaccaaccaaaugc
((((.((((((((((.(((((.((((((..((((((((........))))))))..)))))).))))).)))))))))).)))).

Structure

-    a          A     U      GU        aga 
 uauu gguuggugcA AAGUA UUGCGG  UUUGUCau   a
 |||| |||||||||| ||||| ||||||  ||||||||    
 guaa ccaaccacgu uucau gacguc  aaacggua   a
c    a          g     u      aa        aug 

Annotation confidence Not enough data

Genome context

chr11: 94539922-94540006 [-]

Mature ptr-miR-548l

• Accession: MIMAT0008226
• Description: Pan troglodytes ptr-miR-548l mature miRNA
• Sequence: 15 - AAAAGUAUUUGCGGGUUUUGUC - 36
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70