Stem-loop ptr-mir-548n

Accession

MI0008762

Description

Pan troglodytes ptr-mir-548n precursor miRNA

Literature search

1 open access papers mention ptr-mir-548n
(2 sentences)

Sequence

agguugaugCAAAAGUAAUUGUGGAUUUUGUcguuaaaaaauagcaaaacccgcaauuacuuuugcaccaaccua
((((((.(((((((((((((((((.((((((.(((....))).)))))).))))))))))))))))).)))))).

Structure

-      a                 A      c   a 
 agguug ugCAAAAGUAAUUGUGG UUUUGU guu a
 |||||| ||||||||||||||||| |||||| |||  
 uccaac acguuuucauuaacgcc aaaacg uaa a
a      c                 c      a   a 

Annotation confidence Not enough data

Genome context

KV420936.1: 246113-246187 [+]

Mature ptr-miR-548n

• Accession: MIMAT0008227
• Description: Pan troglodytes ptr-miR-548n mature miRNA
• Sequence: 10 - CAAAAGUAAUUGUGGAUUUUGU - 31
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70