Stem-loop ptr-mir-548p

Accession

MI0008763

Description

Pan troglodytes ptr-mir-548p precursor miRNA

Literature search

1 open access papers mention ptr-mir-548p
(2 sentences)

Sequence

auuagguugguauaaaauuaauugcaguuuuugucauuacuuucaaUAGCAAAAACUGCAGUUACUUUugcaccaauguaaua
((((.((((((.(((((.((((((((((((((((.(((......))).)))))))))))))))).))))).)))))).)))).

Structure

-    g      a     u                c   ac 
 auua guuggu uaaaa uaauugcaguuuuugu auu  u
 |||| |||||| ||||| |||||||||||||||| |||   
 uaau uaacca guUUU AUUGACGUCAAAAACG Uaa  u
a    g      c     C                A   cu 

Annotation confidence Not enough data

Genome context

chr5: 100119979-100120061 [-]

Mature ptr-miR-548p

• Accession: MIMAT0008228
• Description: Pan troglodytes ptr-miR-548p mature miRNA
• Sequence: 47 - UAGCAAAAACUGCAGUUACUUU - 68
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70