Stem-loop ptr-mir-550-2

Accession

MI0008766

Description

Pan troglodytes ptr-mir-550-2 precursor miRNA

Sequence

gaugcuuugcuggcuggugcAGUGCCUGAGGGAGUAAGAGCCCuguuguuguaagauagugucuuacucccucaggcacaucuccaacaagucucu
((.((((.(.(((..(((...((((((((((((((((((.(.(((((.......))))).)))))))))))))))))))))).))).))))).)).

Structure

-  u    u c   cu   gcA                  G C     gu 
 ga gcuu g ugg  ggu   GUGCCUGAGGGAGUAAGA C Cuguu  u
 || |||| | |||  |||   |||||||||||||||||| | |||||  g
 cu ugaa c acc  cua   cacggacucccucauucu g gauag  u
u  c    - a   -u   ---                  - u     aa 

Annotation confidence Not enough data

Genome context

chr7: 29454666-29454761 [+]

Mature ptr-miR-550

• Accession: MIMAT0008230
• Description: Pan troglodytes ptr-miR-550 mature miRNA
• Sequence: 21 - AGUGCCUGAGGGAGUAAGAGCCC - 43
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70