Stem-loop ptr-mir-556

Accession

MI0008774

Description

Pan troglodytes ptr-mir-556 precursor miRNA

Sequence

auaguaauaagaaagaugagcucauuguaauaugagcuucauuuauacauuucAUAUUACCAUUAGCUCAUCUUUuuuauuacuaccuucaaca
.(((((((((((((((((((((.((.((((((((((..............)))))))))).)).))))))))))))))))))))).........

Structure

--------a                     c  u          cuucau 
         uaguaauaagaaagaugagcu au guaauaugag      u
         ||||||||||||||||||||| || ||||||||||       
         aucauuauuuUUUCUACUCGA UA CAUUAUAcuu      u
acaacuucc                     U  C          uacaua 

Annotation confidence Not enough data

Genome context

chr1: 140438995-140439088 [+]

Mature ptr-miR-556

• Accession: MIMAT0008237
• Description: Pan troglodytes ptr-miR-556 mature miRNA
• Sequence: 54 - AUAUUACCAUUAGCUCAUCUUU - 75
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70