Stem-loop ptr-mir-561

Accession

MI0008778

Description

Pan troglodytes ptr-mir-561 precursor miRNA

Sequence

uucauccaccaguccuccaggaacagcaaggaucuuaaacuuugccagagcuacaaaggcAAAGUUUAAGAUCCUUGAAGUUccugggggaaccau
............((((((((((((..((((((((((((((((((((...........))))))))))))))))))))..)))))))))))).....

Structure

uucauccaccag            ag                    agag 
            uccuccaggaac  caaggaucuuaaacuuugcc    c
            ||||||||||||  ||||||||||||||||||||    u
            aggggguccUUG  GUUCCUAGAAUUUGAAAcgg    a
-------uacca            AA                    aaac 

Annotation confidence Not enough data

Genome context

chr2B: 78826498-78826593 [+]

Mature ptr-miR-561

• Accession: MIMAT0008241
• Description: Pan troglodytes ptr-miR-561 mature miRNA
• Sequence: 61 - AAAGUUUAAGAUCCUUGAAGUU - 82
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70