Stem-loop ptr-mir-579

Accession

MI0008789

Description

Pan troglodytes ptr-mir-579 precursor miRNA

Sequence

30 reads, 1.0 reads per million, 15 experiments

auauuagguuaaugcaaaaguaaucgcgguuugugccagaugacgauuugaauuaauaaaUUCAUUUGGUAUAAACCGCGAUUauuuuugcaucaac
.......(((.((((((((((((((((((((((((((((((((..(((((......))))))))))))))))))))))))))))))))))))).)))

Structure

auauuag   a                                cg     aa 
       guu augcaaaaguaaucgcgguuugugccagauga  auuug  u
       ||| ||||||||||||||||||||||||||||||||  |||||   
       caa uacguuuuuaUUAGCGCCAAAUAUGGUUUACU  Uaaau  u
-------   c                                --     aa 

Annotation confidence Not enough data

Genome context

chr5: 81902487-81902583 [+]

Mature ptr-miR-579-3p

• Accession: MIMAT0008252
• Description: Pan troglodytes ptr-miR-579-3p mature miRNA
• Sequence: 61 - UUCAUUUGGUAUAAACCGCGAUU - 83
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70