Stem-loop ptr-mir-582

Accession

MI0008792

Description

Pan troglodytes ptr-mir-582 precursor miRNA

Sequence

179 reads, 2.0 reads per million, 20 experiments

ucugugcucuuugaUUACAGUUGUUCAACCAGUUACUaaucuaacuaauugUAACUGGUUGAACAACUGAACccaaagggugcaaaguagaaacauu
..(((((((((((....(((((((((((((((((((..............)))))))))))))))))))....))))))))))).............

Structure

-----------uc           aUUA                   Uaaucu 
             ugugcucuuug    CAGUUGUUCAACCAGUUAC      a
             |||||||||||    |||||||||||||||||||       
             acgugggaaac    GUCAACAAGUUGGUCAAUg      a
uuacaaagaugaa           cCAA                   uuaauc 

Annotation confidence High

Genome context

chr5: 54790863-54790959 [+]

Mature ptr-miR-582-5p

• Accession: MIMAT0008255
• Description: Pan troglodytes ptr-miR-582-5p mature miRNA
• Sequence: 15 - UUACAGUUGUUCAACCAGUUACU - 37
• Evidence: not_experimental

Mature ptr-miR-582-3p

• Accession: MIMAT0052391
• Description: Pan troglodytes ptr-miR-582-3p mature miRNA
• Sequence: 52 - UAACUGGUUGAACAACUGAAC - 72
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70