Stem-loop ptr-mir-612

Accession

MI0008811

Description

Pan troglodytes ptr-mir-612 precursor miRNA

Sequence

cccaucuggacccuGCUGGGCAGGGCUUCUGAGCUCCUUagcacuagcaggaggggcuccaggggcccucccuccauggcagccaggacaggacucuca
.((.(((((...((((((((.((((((((((((((((((.((....))..)))))))).))))))))))))).....))))))))))...)).......

Structure

------c  --a     acc     -----   C          -        -a  a 
       cc   ucugg   cuGCU     GGG AGGGCUUCUG AGCUCCUU  gc c
       ||   |||||   |||||     ||| |||||||||| ||||||||  ||  
       gg   ggacc   gacgg     ccc ucccggggac ucggggag  cg u
acucuca  aca     ---     uaccu   -          c        ga  a 

Annotation confidence Not enough data

Genome context

chr11: 65507716-65507814 [+]

Mature ptr-miR-612

• Accession: MIMAT0008274
• Description: Pan troglodytes ptr-miR-612 mature miRNA
• Sequence: 15 - GCUGGGCAGGGCUUCUGAGCUCCUU - 39
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70