Stem-loop ptr-mir-650

Accession

MI0008838

Description

Pan troglodytes ptr-mir-650 precursor miRNA

Sequence

agugcuggggucuuAGGAGGCAGCGCUCUCAGGACgucaccaccauggccagggcucugcuccuccucacccuccucacucagggcacaggugau
.((((((((((...(((((((((.(((((..((.(((.......))).))))))).))))..))))).)))))..........))))).......

Structure

------a     ----------     cuu     --    C     CA  A   ca 
       gugcu          ggggu   AGGAG  GCAG GCUCU  GG Cgu  c
       |||||          |||||   |||||  |||| |||||  || |||  c
       cacgg          uccca   uccuc  cguc cggga  cc gua  a
uagugga     gacucacucc     --c     cu    u     --  g   cc 

Annotation confidence Not enough data

Genome context

chr22: 8895031-8895125 [+]

Mature ptr-miR-650

• Accession: MIMAT0008301
• Description: Pan troglodytes ptr-miR-650 mature miRNA
• Sequence: 15 - AGGAGGCAGCGCUCUCAGGAC - 35
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70