Stem-loop ptr-mir-653

Accession

MI0008840

Description

Pan troglodytes ptr-mir-653 precursor miRNA

Sequence

uucauuccuucaGUGUUGAAACAAUCUCUACUGaaccagcuucaaacaaguucacuggaguuuguuucaauauugcaagaaugauaagauggaag
.((((((...((((((((((((((.(((((.(((((.............))))).))))).))))))))))))))...))))))...........

Structure

----------u      cuu              U     C     cagcu 
           ucauuc   caGUGUUGAAACAA CUCUA UGaac     u
           ||||||   |||||||||||||| ||||| |||||     c
           aguaag   guuauaacuuuguu gaggu acuug     a
gaagguagaau      aac              u     c     aacaa 

Annotation confidence Not enough data

Genome context

chr7: 96352356-96352450 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ptr-mir-653

Mature ptr-miR-653

• Accession: MIMAT0008303
• Description: Pan troglodytes ptr-miR-653 mature miRNA
• Sequence: 13 - GUGUUGAAACAAUCUCUACUG - 33
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70