Stem-loop ptr-mir-658

Accession

MI0008844

Description

Pan troglodytes ptr-mir-658 precursor miRNA

Sequence

gcucgguugccgugguugcgggcccggcccgcccgccagcucgcugacagcacgacucagGGCGGAGGGAAGUAGGUCCGUUGGccgguugggaacgag
.((((.((.(((((((.((((((((..(((..(((((((.(((.((....)))))))...))))).)))..)..)))))))..))))..))).))))))

Structure

g    g  g   --    -u       -- gg   gc     ---  c   c  a 
 cucg uu ccg  uggu  gcgggcc  c  ccc  ccgcc   ag ucg ug c
 |||| || |||  ||||  |||||||  |  |||  |||||   || ||| ||  
 gagc aa ggu  gccG  UGCCUGG  G  GGG  GGCGG   uc agc ac a
-    -  g   ug    GU       AU AA   -A     gac  -   -  g 

Annotation confidence Not enough data

Genome context

chr22: 24390227-24390325 [-]

Mature ptr-miR-658

• Accession: MIMAT0008307
• Description: Pan troglodytes ptr-miR-658 mature miRNA
• Sequence: 61 - GGCGGAGGGAAGUAGGUCCGUUGG - 84
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70