Stem-loop ptr-mir-660

Accession

MI0008845

Description

Pan troglodytes ptr-mir-660 precursor miRNA

Sequence

ugcuccuucucccaUACCCAUUGCAUAUCGGAGUUGugaauucucaaaacaccuccugugugcauggauuacaggagggugagccuugucaucgug
.((((.((((((.....((((.((((((.((((.(((...........))).)))).))))))))))......)))))).))))............

Structure

-----------u    c      -caUAC    U      C    U   gaau 
            gcuc uucucc      CCAU GCAUAU GGAG UGu    u
            |||| ||||||      |||| |||||| |||| |||    c
            cgag gggagg      ggua cgugug ccuc aca    u
gugcuacuguuc    u      acauua    -      u    c   aaac 

Annotation confidence Not enough data

Genome context

chrX: 49897995-49898090 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ptr-mir-660

Mature ptr-miR-660

• Accession: MIMAT0008308
• Description: Pan troglodytes ptr-miR-660 mature miRNA
• Sequence: 15 - UACCCAUUGCAUAUCGGAGUUG - 36
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70