Stem-loop ptr-mir-664a

Accession

MI0008848

Description

Pan troglodytes ptr-mir-664a precursor miRNA

Sequence

12705 reads, 127.0 reads per million, 24 experiments

gaacauugaaACUGGCUAGGGAAAAUGAUUGGAUagaaacuauuauucUAUUCAUUUAUCCCCAGCCUACAaaaugaaaaa
...((((......((((.((((...(((.(((((((((.......))))))))).))))))).)))).....)))).....

Structure

--gaa    gaaACU    A    AAA   U         ac 
     cauu      GGCU GGGA   UGA UGGAUagaa  u
     ||||      |||| ||||   ||| |||||||||  a
     guaa      CCGA CCCU   AUU ACUUAUcuu  u
aaaaa    -aACAU    C    ---   U         au 

Annotation confidence High

Genome context

chr1: 199244789-199244869 [-]

Mature ptr-miR-664a-5p

• Accession: MIMAT0052400
• Description: Pan troglodytes ptr-miR-664a-5p mature miRNA
• Sequence: 11 - ACUGGCUAGGGAAAAUGAUUGGAU - 34
• Evidence: not_experimental

Mature ptr-miR-664a-3p

• Accession: MIMAT0008311
• Description: Pan troglodytes ptr-miR-664a-3p mature miRNA
• Sequence: 49 - UAUUCAUUUAUCCCCAGCCUACA - 71
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70