Stem-loop ptr-mir-668

Accession

MI0008850

Description

Pan troglodytes ptr-mir-668 precursor miRNA

Literature search

1 open access papers mention ptr-mir-668
(1 sentences)

Sequence

362 reads, 5.0 reads per million, 13 experiments

guaagugcgccucgggugagcaugcacuuaauguggguguaUGUCACUCGGCUCGGCCCACUACc
...((((.(((((((((((.((((((((((...))))))))))))))))))...))).))))...

Structure

gua    c   ---        g          a 
   agug gcc   ucggguga caugcacuua  
   |||| |||   |||||||| |||||||||| u
   UCAC CGG   GGCUCACU GUaugugggu  
cCA    C   CUC        -          g 

Annotation confidence Not enough data

Genome context

chr14: 86303493-86303557 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from ptr-mir-668

Mature ptr-miR-668-3p

• Accession: MIMAT0008313
• Description: Pan troglodytes ptr-miR-668-3p mature miRNA
• Sequence: 42 - UGUCACUCGGCUCGGCCCACUAC - 64
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70