Stem-loop ptr-mir-7-1

Accession

MI0008853

Description

Pan troglodytes ptr-mir-7-1 precursor miRNA

Sequence

uuggauguuggccuaguucugugUGGAAGACUAGUGAUUUUGUUGUuuuuagauaacuaaaucgacaacaaaucacagucugccauauggcacaggccaugccucuaca
.((((.((((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).)))))))).)).))))..

Structure

-u    u  -      a  u        A     A       U      --     a 
  ugga gu uggccu gu cugugUGG AGACU GUGAUUU GUUGUu  uuuag u
  |||| || |||||| || |||||||| ||||| ||||||| ||||||  |||||  
  aucu cg accgga ca gguauacc ucuga cacuaaa caacag  aaauc a
ac    c  u      -  c        g     -       -      cu     a 

Annotation confidence Not enough data

Genome context

chr9: 61289459-61289567 [-]

Mature ptr-miR-7

• Accession: MIMAT0002485
• Description: Pan troglodytes ptr-miR-7 mature miRNA
• Sequence: 24 - UGGAAGACUAGUGAUUUUGUUGU - 46
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70