Stem-loop ptr-mir-744

Accession

MI0008856

Description

Pan troglodytes ptr-mir-744 precursor miRNA

Literature search

1 open access papers mention ptr-mir-744
(1 sentences)

Sequence

69853 reads, 583.0 reads per million, 24 experiments

uugggcaaggUGCGGGGCUAGGGCUAACAGCAgucuuacugaagguuuccuggaaaccacgCACAUGCUGUUGCCACUAACCUCAAccuuacucggu
(((((.(((((..((((.((((((.(((((((...........((((((...)))))).......)))))))))).))).)))).))))).))))).

Structure

-     c     GC    C   -   U       gucuuacugaa      c 
 uuggg aaggU  GGGG UAG GGC AACAGCA           gguuuc  
 ||||| |||||  |||| ||| ||| |||||||           |||||| u
 ggcuc uuccA  CUCC AUC CCG UUGUCGU           ccaaag  
u     a     -A    A   A   -       ----ACACgca      g 

Annotation confidence Medium

Genome context

chr17: 44521448-44521544 [-]

Mature ptr-miR-744-5p

• Accession: MIMAT0008317
• Description: Pan troglodytes ptr-miR-744-5p mature miRNA
• Sequence: 11 - UGCGGGGCUAGGGCUAACAGCA - 32
• Evidence: not_experimental

Mature ptr-miR-744-3p

• Accession: MIMAT0052403
• Description: Pan troglodytes ptr-miR-744-3p mature miRNA
• Sequence: 62 - CACAUGCUGUUGCCACUAACCUCAA - 86
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70