miRBase entry: ptr-mir-770

Stem-loop ptr-mir-770


Accession
MI0008861
Description
Pan troglodytes ptr-mir-770 precursor miRNA


Sequence

317 reads, 6.0 reads per million, 9 experiments
ggagccaccuuccgagccUCCAGUACCACGUGUCAGGGCCAcaugagcugggccucgUGGGCCUGAUGUGGUGCUGGGGCcucaggggucugcucuu
(((((.(((((..(((.((((((((((((..((((((.((.((((((......)))))))))))))))))))))))))).))).)))))..))))).

Structure
-     -c     cc   c            GU      G  A      cu 
 ggagc  accuu  gag cUCCAGUACCAC  GUCAGG CC caugag  g
 |||||  |||||  ||| ||||||||||||  |||||| || ||||||   
 ucucg  ugggg  cuc GGGGUCGUGGUG  UAGUCC GG GUgcuc  g
u     uc     -a   C            --      -  -      cg 


Annotation confidence High
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Genome context
chr14: 86096837-86096933 [+]

Database links

Mature ptr-miR-770-5p

Accession MIMAT0008322
Description Pan troglodytes ptr-miR-770-5p mature miRNA
Sequence 19 - UCCAGUACCACGUGUCAGGGCCA - 41
Evidence not_experimental

Mature ptr-miR-770-3p

Accession MIMAT0052405
Description Pan troglodytes ptr-miR-770-3p mature miRNA
Sequence 58 - UGGGCCUGAUGUGGUGCUGGGGC - 80
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70