Stem-loop ptr-mir-876

Accession

MI0008866

Description

Pan troglodytes ptr-mir-876 precursor miRNA

Sequence

691 reads, 12.0 reads per million, 12 experiments

ugaagugcugUGGAUUUCUUUGUGAAUCACCAUaucuaagcuaauguggUGGUGGUUUACAAAGUAAUUCAUagugcuuc
.(((((((((((((((.((((((((((((((((..(.........)..)))))))))))))))).)))))))))))))))

Structure

u               U                au uaa 
 gaagugcugUGGAUU CUUUGUGAAUCACCAU  c   g
 ||||||||||||||| ||||||||||||||||  |   c
 cuucgugaUACUUAA GAAACAUUUGGUGGUg  g   u
-               U                gu uaa 

Annotation confidence High

Genome context

chr9: 29442202-29442281 [-]

Mature ptr-miR-876-5p

• Accession: MIMAT0052408
• Description: Pan troglodytes ptr-miR-876-5p mature miRNA
• Sequence: 11 - UGGAUUUCUUUGUGAAUCACCAU - 33
• Evidence: not_experimental

Mature ptr-miR-876-3p

• Accession: MIMAT0008327
• Description: Pan troglodytes ptr-miR-876-3p mature miRNA
• Sequence: 50 - UGGUGGUUUACAAAGUAAUUCAU - 72
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70