Accession
MI0008939
Description
Herpes Simplex Virus 1
hsv1-mir-H4 precursor miRNA
Sequence
gccgggguGGUAGAGUUUGACAGGCAAGCAugugcgugcagaggcgaguagugCUUGCCUGUCUAACUCGCUAGUcucggc
(((((((((((.(((((.(((((((((((((.(((.(((....))).)))))))))))))))).))))))))).)))))))
(((((((((((.(((((.(((((((((((((.(((.(((....))).)))))))))))))))).))))))))).)))))))
Structure
- A U g g a
gccgggg uGGU GAGUU GACAGGCAAGCAu ugc ugc g
||||||| |||| ||||| ||||||||||||| ||| |||
cggcucU AUCG CUCAA CUGUCCGUUCgug aug gcg a
G - U - a g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
The mature sequence from the 5' arm of this hairpin was named miR-LAT-ICP34.5 in [2].
Genome context
Unknown
Database links
Mature hsv1-miR-H4-5p
| Accession | MIMAT0008401 |
| Description | Herpes Simplex Virus 1 hsv1-miR-H4-5p mature miRNA |
| Sequence | 9 - GGUAGAGUUUGACAGGCAAGCA - 30 |
| Evidence |
experimental
454 [1], qRT-PCR [1], Illumina [3-4] |
Mature hsv1-miR-H4-3p
| Accession | MIMAT0008402 |
| Description | Herpes Simplex Virus 1 hsv1-miR-H4-3p mature miRNA |
| Sequence | 54 - CUUGCCUGUCUAACUCGCUAGU - 75 |
| Evidence |
experimental
454 [1], qRT-PCR [1], cloned [2], Illumina [3] |
References
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