miRBase entry: dan-mir-92b

Stem-loop dan-mir-92b

Accession

MI0008942

Description

Drosophila ananassae dan-mir-92b precursor miRNA

Gene family

MIPF0000013; mir-25

Sequence

acgucaccugauguaggccgugcccggugcuuauuuguuacuuuuggaaauacaAAUUGCACUAGUCCCGGCCUGCagugagugucaa
..(.(((....(((((((((.(.(.(((((..((((((.............)))))).))))).).).)))))))))....))).)..

Structure

ac u   cuga         u c c     uu      uacuu 
  g cac    uguaggccg g c ggugc  auuugu     u
  | |||    ||||||||| | | |||||  ||||||     u
  c gug    aCGUCCGGC C G UCACG  UAAaca     g
aa u   agug         C U A     -U      uaaag

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_13340: 3732646-3732733 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dan-mir-92b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-92b

Accession	MIMAT0008405
Description	Drosophila ananassae dan-miR-92b mature miRNA
Sequence	55 - AAUUGCACUAGUCCCGGCCUGC - 76
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218