miRBase entry: dan-mir-288

Stem-loop dan-mir-288

Accession

MI0008943

Description

Drosophila ananassae dan-mir-288 precursor miRNA

Sequence

caugucguaauuagcagggcacagaauugccggcgauaauuaaugacguuggucacguuggUUUCAUGUCGAUUUCAUUUCAUGacacggcc
..((((((((.......((((..(((..(((((((........((((....)))))))))))))).))))........)).)))))).....

Structure

---ca      -  -uuagcag    ca   uu       auaauuaa    g 
     ugucgu aa        ggca  gaa  gccggcg        ugac u
     |||||| ||        ||||  |||  |||||||        ||||  
     acaGUA UU        CUGU  CUU  Ugguugc        acug u
ccggc      C  UACUUUAG    -A   --       --------    g

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_12916: 7118748-7118839 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dan-mir-288

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-288

Accession	MIMAT0008406
Description	Drosophila ananassae dan-miR-288 mature miRNA
Sequence	62 - UUUCAUGUCGAUUUCAUUUCAUG - 84
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218