miRBase entry: dan-mir-277

Stem-loop dan-mir-277


Accession
MI0008944
Description
Drosophila ananassae dan-mir-277 precursor miRNA
Gene family
MIPF0000156; mir-277


Sequence

uugaagguuuugggcugcgugucaggagugcauuugcacugaaacauucugaagcuugUAAAUGCACUAUCUGGUACGACAuuccagaacguacaauc
(((.(.((((((((.(((((((((((((((((((((((((............))..)))))))))))).))))))))).)).)))))))).).)))..

Structure
--   a g        c  -         -            --  gaaac 
  uug a guuuuggg ug cgugucagg agugcauuugca  cu     a
  ||| | |||||||| || ||||||||| ||||||||||||  ||      
  aac u caagaccu AC GCAUGGUCU UCACGUAAAUgu  ga     u
cu   a g        u  A         A            uc  agucu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_13340: 6488996-6489093 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dan-mir-277
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dan-miR-277

Accession MIMAT0008407
Description Drosophila ananassae dan-miR-277 mature miRNA
Sequence 59 - UAAAUGCACUAUCUGGUACGACA - 81
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218