Stem-loop dan-mir-281-2

Accession

MI0008965

Description

Drosophila ananassae dan-mir-281-2 precursor miRNA

Sequence

cgaauagugaaaugAAGAGAGCUAUCCGUCGACAGUcaaguuaaaacacggauuguaauacUGUCAUGGAAUUGCUCUCUUUGUauaacauucg
(((((.((...(((((((((((..(((((.((((((..((((........)))).....)))))))))))...)))))))))))...)))))))

Structure

     a  gaa           -UA     C      ---ca    aaa 
cgaau gu   augAAGAGAGC   UCCGU GACAGU     aguu   a
||||| ||   |||||||||||   ||||| ||||||     ||||    
gcuua ca   UGUUUCUCUCG   AGGUA CUGUca     uuag   c
     -  aua           UUA     -      uaaug    gca 

Annotation confidence Not enough data

Genome context

scaffold_13266: 2568938-2569031 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dan-mir-281-2

Mature dan-miR-281-2-5p

• Accession: MIMAT0009182
• Description: Drosophila ananassae dan-miR-281-2-5p mature miRNA
• Sequence: 15 - AAGAGAGCUAUCCGUCGACAGU - 36
• Evidence: not_experimental

Mature dan-miR-281-3p

• Accession: MIMAT0008429
• Description: Drosophila ananassae dan-miR-281-3p mature miRNA
• Sequence: 62 - UGUCAUGGAAUUGCUCUCUUUGU - 84
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218