miRBase entry: dan-mir-275

Stem-loop dan-mir-275

Accession

MI0008985

Description

Drosophila ananassae dan-mir-275 precursor miRNA

Gene family

MIPF0000187; mir-275

Sequence

agucuccuaccuugcgcgcuaaucagugaccggggcugguuuuugcaacagUCAGGUACCUGAAGUAGCGCGCGugguggcagacau
.((((.(((((.(((((((((.((((..(((..(((((..........))))).)))..))))..))))))))).))))).))))..

Structure

-a    c     u         -a    ug   gg     guuu 
  gucu cuacc ugcgcgcua  ucag  acc  ggcug    u
  |||| ||||| |||||||||  ||||  |||  |||||     
  caga ggugg GCGCGCGAU  AGUC  UGG  CUgac    u
ua    c     u         GA    CA   -A     aacg

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_12916: 15333995-15334081 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dan-mir-275

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-275

Accession	MIMAT0008451
Description	Drosophila ananassae dan-miR-275 mature miRNA
Sequence	52 - UCAGGUACCUGAAGUAGCGCGCG - 74
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218