miRBase entry: dan-mir-309

Stem-loop dan-mir-309

Accession

MI0008990

Description

Drosophila ananassae dan-mir-309 precursor miRNA

Gene family

MIPF0000140; mir-3

Sequence

auuauacgacaaaccuuguucgguuuugccaauuuccuagcaGCACUGGGUAAAGUUUGUCCUAuaau
((((((.(((((((.(((((((((.((((..........)))).))))))))).))))))).))))))

Structure

      c       c         u    caau 
auuaua gacaaac uuguucggu uugc    u
|||||| ||||||| ||||||||| ||||     
uaauAU CUGUUUG AAUGGGUCA Gacg    u
      C       A         C    aucc

Annotation confidence Not enough data

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Genome context

scaffold_13266: 9731113-9731180 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dan-mir-309

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-309

Accession	MIMAT0008453
Description	Drosophila ananassae dan-miR-309 mature miRNA
Sequence	43 - GCACUGGGUAAAGUUUGUCCUA - 64
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218