miRBase entry: der-mir-308

Stem-loop der-mir-308


Accession
MI0009018
Description
Drosophila erecta der-mir-308 precursor miRNA


Sequence

5497 reads, 22.0 reads per million, 19 experiments
cuCGCAGUAUAUUUUUGUGUUUUGuuucguuuugcaaaucaAAUCACAGGAUUAUACUGUGAG
(((((((((((.(((((((.((((.((.((...)).)).)))).))))))).)))))))))))

Structure
           U       U    u  c  u 
cuCGCAGUAUA UUUUGUG UUUG uu gu  
||||||||||| ||||||| |||| || || u
GAGUGUCAUAU AGGACAC AAac aa cg  
           U       U    u  a  u 


Annotation confidence High
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Genome context
scaffold_4845: 15739250-15739312 [+]

Database links

Mature der-miR-308-5p

Accession MIMAT0053293
Description Drosophila erecta der-miR-308-5p mature miRNA
Sequence 3 - CGCAGUAUAUUUUUGUGUUUUG - 24
Evidence not_experimental

Mature der-miR-308-3p

Accession MIMAT0008479
Description Drosophila erecta der-miR-308-3p mature miRNA
Sequence 42 - AAUCACAGGAUUAUACUGUGAG - 63
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218