Stem-loop der-mir-283

Accession

MI0009019

Description

Drosophila erecta der-mir-283 precursor miRNA

Sequence

131214 reads, 570.0 reads per million, 19 experiments

acgauucucaaaggUAAAUAUCAGCUGGUAAUUCUgggagcuaagccuaaauaugaaacacuCGGAAUUUCAGUUGGUAUCGACuuuuuugaauu
..(((((..((((((..(((((((((((.(((((((((......................))))))))))))))))))))..))))))..)))))

Structure

ac     uc      AA           U         agcuaagccu 
  gauuc  aaaggU  AUAUCAGCUGG AAUUCUggg          a
  |||||  ||||||  ||||||||||| |||||||||           
  uuaag  uuuuCA  UAUGGUUGACU UUAAGGCuc          a
--     uu      GC           -         acaaaguaua 

Annotation confidence High

Genome context

scaffold_4690: 11632490-11632584 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from der-mir-283

Mature der-miR-283-5p

• Accession: MIMAT0008480
• Description: Drosophila erecta der-miR-283-5p mature miRNA
• Sequence: 15 - UAAAUAUCAGCUGGUAAUUCU - 35
• Evidence: not_experimental

Mature der-miR-283-3p

• Accession: MIMAT0053294
• Description: Drosophila erecta der-miR-283-3p mature miRNA
• Sequence: 63 - CGGAAUUUCAGUUGGUAUCGAC - 84
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218