Stem-loop der-mir-31b

Accession

MI0009020

Description

Drosophila erecta der-mir-31b precursor miRNA

Sequence

422602 reads, 1713.0 reads per million, 19 experiments

caaauaaugaauuUGGCAAGAUGUCGGAAUAGCUGagagcacagcggaucgagccucuuaucguccgaaaaaaugugaauauuuuugaaaagcGGCUAUGCCUCAUCUAGUCAAUugcauuacuuug
(((((((((...(((((.(((((..((.(((((((.........((((.(((........))))))).(((((((....)))))))......))))))).)).))))).)))))...))))).))))

Structure

    -     aau     A     UC  A       ----------------agagcacag    u   gcc 
caaa uaaug   uUGGC AGAUG  GG AUAGCUG                         cgga cga   u
|||| |||||   ||||| |||||  || |||||||                         |||| |||    
guuu auuac   AACUG UCUAC  CC UAUCGGc                         gccu gcu   c
    c     guU     A     -U  G       gaaaaguuuuuauaaguguaaaaaa    -   auu 

Annotation confidence High

Genome context

scaffold_4690: 6225310-6225436 [+]

Mature der-miR-31b-5p

• Accession: MIMAT0008481
• Description: Drosophila erecta der-miR-31b-5p mature miRNA
• Sequence: 14 - UGGCAAGAUGUCGGAAUAGCUG - 35
• Evidence: not_experimental

Mature der-miR-31b-3p

• Accession: MIMAT0053295
• Description: Drosophila erecta der-miR-31b-3p mature miRNA
• Sequence: 94 - GGCUAUGCCUCAUCUAGUCAAU - 115
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218