miRBase entry: der-mir-287

Stem-loop der-mir-287

Accession

MI0009022

Description

Drosophila erecta der-mir-287 precursor miRNA

Sequence

gacgcuggauguaugggugugugggcucugaaauuuugcacacauuuacaauaauuguaaaUGUGUUGAAAAUCGUUUGCACgacugcga
..(((..........(((((((((((...((..((((..((((((((((((...))))))))))))..)))))))))))))).)))))).

Structure

ga   uggauguaug   -        ucu  aa    gc            u 
  cgc          ggu gugugggc   ga  uuuu  acacauuuacaa  
  |||          ||| ||||||||   ||  ||||  |||||||||||| a
  gcg          uca CACGUUUG   CU  AAAA  UGUGUaaauguu  
-a   ----------   g        ---  --    GU            a

Annotation confidence Not enough data

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Genome context

scaffold_4845: 6676092-6676181 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from der-mir-287

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-287

Accession	MIMAT0008483
Description	Drosophila erecta der-miR-287 mature miRNA
Sequence	62 - UGUGUUGAAAAUCGUUUGCAC - 82
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218