miRBase entry: der-mir-133

Stem-loop der-mir-133

Accession

MI0009029

Description

Drosophila erecta der-mir-133 precursor miRNA

Sequence

ugcaacgcuguguguagcugguugacaucgggucagaucuguuuuccuagcauUUGGUCCCCUUCAACCAGCUGUagccagugguugau
..((((((((..(((((((((((((....((((((((((((......))).)))))).)))..)))))))))))))..)))).))))..

Structure

ug    -    ug             cauc   -      -   uu 
  caac gcug  uguagcugguuga    ggg ucagau cug  u
  |||| ||||  |||||||||||||    ||| |||||| |||   
  guug ugac  aUGUCGACCAACU    CCC GGUUua gau  u
ua    g    cg             --UC   U      c   cc

Annotation confidence Not enough data

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Genome context

scaffold_4845: 3836627-3836715 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from der-mir-133

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-133

Accession	MIMAT0008490
Description	Drosophila erecta der-miR-133 mature miRNA
Sequence	54 - UUGGUCCCCUUCAACCAGCUGU - 75
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218